Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 AC142086.2-201ENST00000569753 217 ntBASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC33Q8N5R6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC33Q8N5R6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 FEM1AP4-201ENST00000443167 1987 ntBASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 AL138781.1-201ENST00000566567 1274 ntBASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC33Q8N5R6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 GUSBP6-202ENST00000438529 1198 ntBASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 SLC7A5P2-201ENST00000553010 536 ntBASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC33Q8N5R6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 AC010141.2-201ENST00000452426 721 ntBASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC33Q8N5R6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 SLC29A4P1-201ENST00000398760 971 ntBASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 TSPY20P-201ENST00000450910 630 ntBASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 TMEM191A-211ENST00000637163 1067 ntBASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC33Q8N5R6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms