Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO39Q8N4B4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO39Q8N4B4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO39Q8N4B4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
FBXO39Q8N4B4 AC009237.3-201ENST00000393279 1427 ntBASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 AC104187.1-201ENST00000607510 612 ntBASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 AC005224.4-201ENST00000583262 1652 ntBASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO39Q8N4B4 KRT87P-202ENST00000534226 1464 ntBASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 MFSD11-216ENST00000590393 1141 ntBASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO39Q8N4B4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO39Q8N4B4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms