Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.31
LTBP4Q8N2S1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
LTBP4Q8N2S1 NUDT16P1-203ENST00000513809 620 ntBASIC29.45■■■□□ 2.31
LTBP4Q8N2S1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
LTBP4Q8N2S1 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.45■■■□□ 2.31
LTBP4Q8N2S1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 REXO1L10P-201ENST00000615707 1290 ntBASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC29.45■■■□□ 2.3
LTBP4Q8N2S1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 AL031963.3-201ENST00000606441 850 ntBASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 MYC-208ENST00000641036 567 ntBASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 KRT18P22-201ENST00000402024 1347 ntBASIC29.44■■■□□ 2.3
LTBP4Q8N2S1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 LINC00526-201ENST00000581067 1875 ntBASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC29.43■■■□□ 2.3
LTBP4Q8N2S1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 AC010203.1-204ENST00000548782 407 ntBASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTBP4Q8N2S1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 UNC93B2-201ENST00000285383 730 ntBASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 FAM197Y1-201ENST00000421178 764 ntBASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 AC009947.2-201ENST00000444014 672 ntBASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LTBP4Q8N2S1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 MIR1238-201ENST00000408483 83 ntBASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 AL450487.1-201ENST00000426799 995 ntBASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LTBP4Q8N2S1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
LTBP4Q8N2S1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
LTBP4Q8N2S1 AL390955.1-201ENST00000428694 934 ntBASIC29.39■■■□□ 2.3
LTBP4Q8N2S1 AC022616.7-201ENST00000525383 220 ntBASIC29.39■■■□□ 2.3
LTBP4Q8N2S1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC29.39■■■□□ 2.3
LTBP4Q8N2S1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC29.39■■■□□ 2.3
LTBP4Q8N2S1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.39■■■□□ 2.29
LTBP4Q8N2S1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
LTBP4Q8N2S1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LTBP4Q8N2S1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LTBP4Q8N2S1 NAPSB-206ENST00000562112 1266 ntBASIC29.38■■■□□ 2.29
LTBP4Q8N2S1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
LTBP4Q8N2S1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC29.38■■■□□ 2.29
LTBP4Q8N2S1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms