Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.12■■□□□ 1.29
DHX40Q8IX18 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.12■■□□□ 1.29
DHX40Q8IX18 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
DHX40Q8IX18 PBX2P1-201ENST00000493219 1291 ntBASIC23.12■■□□□ 1.29
DHX40Q8IX18 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.12■■□□□ 1.29
DHX40Q8IX18 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.12■■□□□ 1.29
DHX40Q8IX18 FP700111.2-201ENST00000619190 1892 ntBASIC23.12■■□□□ 1.29
DHX40Q8IX18 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DHX40Q8IX18 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
DHX40Q8IX18 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.11■■□□□ 1.29
DHX40Q8IX18 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.11■■□□□ 1.29
DHX40Q8IX18 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DHX40Q8IX18 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.11■■□□□ 1.29
DHX40Q8IX18 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DHX40Q8IX18 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DHX40Q8IX18 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
DHX40Q8IX18 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
DHX40Q8IX18 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.1■■□□□ 1.29
DHX40Q8IX18 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.1■■□□□ 1.29
DHX40Q8IX18 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
DHX40Q8IX18 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 AC005837.3-201ENST00000612163 286 ntBASIC23.1■■□□□ 1.29
DHX40Q8IX18 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DHX40Q8IX18 AC099778.1-201ENST00000568593 1911 ntBASIC23.1■■□□□ 1.29
DHX40Q8IX18 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.09■■□□□ 1.29
DHX40Q8IX18 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.09■■□□□ 1.29
DHX40Q8IX18 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.09■■□□□ 1.29
DHX40Q8IX18 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 AL136162.1-201ENST00000607711 1078 ntBASIC23.09■■□□□ 1.29
DHX40Q8IX18 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.09■■□□□ 1.29
DHX40Q8IX18 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
DHX40Q8IX18 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.09■■□□□ 1.29
DHX40Q8IX18 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.08■■□□□ 1.29
DHX40Q8IX18 AC106739.1-201ENST00000617035 715 ntBASIC23.08■■□□□ 1.29
DHX40Q8IX18 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
DHX40Q8IX18 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.08■■□□□ 1.28
DHX40Q8IX18 AC009237.3-201ENST00000393279 1427 ntBASIC23.08■■□□□ 1.28
DHX40Q8IX18 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
DHX40Q8IX18 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.07■■□□□ 1.28
DHX40Q8IX18 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DHX40Q8IX18 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.07■■□□□ 1.28
DHX40Q8IX18 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.07■■□□□ 1.28
DHX40Q8IX18 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DHX40Q8IX18 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.07■■□□□ 1.28
DHX40Q8IX18 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
DHX40Q8IX18 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DHX40Q8IX18 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DHX40Q8IX18 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DHX40Q8IX18 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.06■■□□□ 1.28
DHX40Q8IX18 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.06■■□□□ 1.28
DHX40Q8IX18 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DHX40Q8IX18 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
DHX40Q8IX18 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.06■■□□□ 1.28
DHX40Q8IX18 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.06■■□□□ 1.28
DHX40Q8IX18 BX842568.3-201ENST00000418104 571 ntBASIC23.06■■□□□ 1.28
DHX40Q8IX18 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.06■■□□□ 1.28
DHX40Q8IX18 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.06■■□□□ 1.28
DHX40Q8IX18 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DHX40Q8IX18 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms