Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 RBM17P2-201ENST00000616397 1405 ntBASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 AC083906.2-201ENST00000511578 360 ntBASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM48Q8IWZ4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 AL355802.2-201ENST00000402069 882 ntBASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 AF201337.1-201ENST00000520239 748 ntBASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM48Q8IWZ4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 AC069236.1-201ENST00000604339 616 ntBASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 AC068338.2-201ENST00000563278 1430 ntBASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRIM48Q8IWZ4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 AC105036.2-201ENST00000569468 176 ntBASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 AC243732.1-201ENST00000612648 864 ntBASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM48Q8IWZ4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 AL591742.1-201ENST00000604433 565 ntBASIC20.33■□□□□ 0.85
TRIM48Q8IWZ4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM48Q8IWZ4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TRIM48Q8IWZ4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM48Q8IWZ4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM48Q8IWZ4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms