Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRTM1Q86UE6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 DUX4L19-201ENST00000557448 1267 ntBASIC18.02■□□□□ 0.48
LRRTM1Q86UE6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRTM1Q86UE6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRTM1Q86UE6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRTM1Q86UE6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LRRTM1Q86UE6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRTM1Q86UE6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRRTM1Q86UE6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRTM1Q86UE6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRTM1Q86UE6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 FP700111.2-201ENST00000619190 1892 ntBASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 AC112907.3-201ENST00000577781 2400 ntBASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 GUSBP5-201ENST00000418136 578 ntBASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 AC133561.4-201ENST00000566112 224 ntBASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRRTM1Q86UE6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 BX005040.4-201ENST00000637145 1518 ntBASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms