Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC141Q6ZP82 RPPH1-201ENST00000516869 333 ntBASIC31.33■■■□□ 2.61
CCDC141Q6ZP82 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC31.33■■■□□ 2.61
CCDC141Q6ZP82 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC31.33■■■□□ 2.61
CCDC141Q6ZP82 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC141Q6ZP82 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 C1QBPP2-201ENST00000528754 825 ntBASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC141Q6ZP82 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.3■■■□□ 2.6
CCDC141Q6ZP82 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 AC087633.2-202ENST00000565166 1439 ntBASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC141Q6ZP82 HES2-205ENST00000487437 968 ntTSL 3 BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
CCDC141Q6ZP82 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 FAM197Y4-202ENST00000622692 608 ntBASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.27■■■□□ 2.6
CCDC141Q6ZP82 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 KRT17P3-201ENST00000420566 1262 ntBASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CCDC141Q6ZP82 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC141Q6ZP82 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms