Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 AC080038.3-201ENST00000623346 1952 ntBASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM53Q6P2H8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM53Q6P2H8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM53Q6P2H8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 AC105265.2-201ENST00000467189 838 ntBASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TMEM53Q6P2H8 AC092053.2-201ENST00000640557 1818 ntBASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 MIR572-201ENST00000384983 95 ntBASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 AC105233.4-201ENST00000642045 216 ntBASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM53Q6P2H8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 AL034346.1-201ENST00000568244 1277 ntBASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM53Q6P2H8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms