Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 AC025884.2-201ENST00000553429 711 ntBASIC10.42□□□□□ -0.74
LINC01554Q52M75 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01554Q52M75 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01554Q52M75 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 AC008894.3-201ENST00000624324 3103 ntBASIC10.41□□□□□ -0.74
LINC01554Q52M75 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 MIR7108-201ENST00000614319 87 ntBASIC10.41□□□□□ -0.74
LINC01554Q52M75 MIR6089-201ENST00000616698 64 ntBASIC10.41□□□□□ -0.74
LINC01554Q52M75 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01554Q52M75 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LINC01554Q52M75 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 LINC01126-201ENST00000623515 1646 ntBASIC10.4□□□□□ -0.74
LINC01554Q52M75 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms