Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 KRT19P1-201ENST00000405746 1186 ntBASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRFAM7AQ494W8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 AF106564.1-201ENST00000607058 2553 ntBASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 NCF1B-203ENST00000435988 1254 ntBASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 CROCCP5-201ENST00000436658 830 ntBASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 AC066615.1-201ENST00000640911 628 ntBASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 AC138932.1-201ENST00000534164 6830 ntBASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRFAM7AQ494W8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRFAM7AQ494W8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 GPX1P1-201ENST00000388829 606 ntBASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 KRT18P11-201ENST00000435214 1283 ntBASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 KRT18P61-201ENST00000585825 1298 ntBASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 AC073130.3-201ENST00000624389 2278 ntBASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRFAM7AQ494W8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRFAM7AQ494W8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms