Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 AC011484.1-201ENST00000377652 1995 ntBASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 AC034268.1-201ENST00000441047 882 ntBASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 NTF6G-201ENST00000591094 616 ntBASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RSPO1Q2MKA7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 FEM1AP1-201ENST00000431297 1995 ntBASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.03■□□□□ 0.48
RSPO1Q2MKA7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 KRT19P1-201ENST00000405746 1186 ntBASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 AC120498.10-201ENST00000621827 505 ntBASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO1Q2MKA7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO1Q2MKA7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO1Q2MKA7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms