Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCS1Q01581 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
HMGCS1Q01581 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCS1Q01581 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCS1Q01581 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HMGCS1Q01581 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGCS1Q01581 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCS1Q01581 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 IRS3P-201ENST00000223076 1006 ntBASIC20.01■□□□□ 0.79
HMGCS1Q01581 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGCS1Q01581 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
HMGCS1Q01581 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS1Q01581 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMGCS1Q01581 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HMGCS1Q01581 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20■□□□□ 0.79
HMGCS1Q01581 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMGCS1Q01581 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20■□□□□ 0.79
HMGCS1Q01581 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS1Q01581 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 AC079140.4-201ENST00000507448 529 ntBASIC19.99■□□□□ 0.79
HMGCS1Q01581 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS1Q01581 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCS1Q01581 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HMGCS1Q01581 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS1Q01581 AP004607.4-201ENST00000530158 1459 ntBASIC19.98■□□□□ 0.79
HMGCS1Q01581 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGCS1Q01581 AC073314.1-201ENST00000568729 2216 ntBASIC19.98■□□□□ 0.79
HMGCS1Q01581 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGCS1Q01581 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGCS1Q01581 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HMGCS1Q01581 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 ZNRF2P3-201ENST00000424200 374 ntBASIC19.97■□□□□ 0.79
HMGCS1Q01581 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMGCS1Q01581 KRT87P-202ENST00000534226 1464 ntBASIC19.97■□□□□ 0.79
HMGCS1Q01581 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS1Q01581 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCS1Q01581 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCS1Q01581 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCS1Q01581 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCS1Q01581 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCS1Q01581 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCS1Q01581 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCS1Q01581 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGCS1Q01581 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HMGCS1Q01581 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCS1Q01581 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HMGCS1Q01581 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCS1Q01581 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCS1Q01581 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCS1Q01581 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms