Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPXP78539 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPXP78539 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPXP78539 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SRPXP78539 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
SRPXP78539 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPXP78539 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPXP78539 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPXP78539 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPXP78539 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPXP78539 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPXP78539 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPXP78539 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SRPXP78539 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRPXP78539 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.09■□□□□ 0.33
SRPXP78539 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SRPXP78539 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.09■□□□□ 0.33
SRPXP78539 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRPXP78539 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.09■□□□□ 0.33
SRPXP78539 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPXP78539 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
SRPXP78539 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.09■□□□□ 0.33
SRPXP78539 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPXP78539 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.08■□□□□ 0.33
SRPXP78539 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPXP78539 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.08■□□□□ 0.33
SRPXP78539 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
SRPXP78539 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPXP78539 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPXP78539 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPXP78539 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPXP78539 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPXP78539 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPXP78539 AP005435.1-201ENST00000529293 1178 ntBASIC17.08■□□□□ 0.32
SRPXP78539 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.08■□□□□ 0.32
SRPXP78539 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.08■□□□□ 0.32
SRPXP78539 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SRPXP78539 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPXP78539 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.08■□□□□ 0.32
SRPXP78539 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPXP78539 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SRPXP78539 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SRPXP78539 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.07■□□□□ 0.32
SRPXP78539 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SRPXP78539 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.07■□□□□ 0.32
SRPXP78539 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPXP78539 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SRPXP78539 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPXP78539 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPXP78539 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.07■□□□□ 0.32
SRPXP78539 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 AC239859.2-201ENST00000444165 318 ntBASIC17.07■□□□□ 0.32
SRPXP78539 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SRPXP78539 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.07■□□□□ 0.32
SRPXP78539 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPXP78539 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPXP78539 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SRPXP78539 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPXP78539 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms