Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 AC131281.2-201ENST00000520478 145 ntBASIC19.14■□□□□ 0.65
SMIM11AP58511 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SMIM11AP58511 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.14■□□□□ 0.65
SMIM11AP58511 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.14■□□□□ 0.65
SMIM11AP58511 AC055733.4-201ENST00000638462 1354 ntBASIC19.14■□□□□ 0.65
SMIM11AP58511 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.14■□□□□ 0.65
SMIM11AP58511 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SMIM11AP58511 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.14■□□□□ 0.65
SMIM11AP58511 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM11AP58511 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.14■□□□□ 0.65
SMIM11AP58511 AC007225.1-201ENST00000566331 1836 ntBASIC19.14■□□□□ 0.65
SMIM11AP58511 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMIM11AP58511 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM11AP58511 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM11AP58511 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM11AP58511 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM11AP58511 IGHV3-19-201ENST00000521488 291 ntBASIC19.13■□□□□ 0.65
SMIM11AP58511 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.13■□□□□ 0.65
SMIM11AP58511 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM11AP58511 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM11AP58511 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.13■□□□□ 0.65
SMIM11AP58511 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM11AP58511 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM11AP58511 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM11AP58511 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMIM11AP58511 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.12■□□□□ 0.65
SMIM11AP58511 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.12■□□□□ 0.65
SMIM11AP58511 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMIM11AP58511 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMIM11AP58511 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.12■□□□□ 0.65
SMIM11AP58511 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMIM11AP58511 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.12■□□□□ 0.65
SMIM11AP58511 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM11AP58511 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.11■□□□□ 0.65
SMIM11AP58511 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.11■□□□□ 0.65
SMIM11AP58511 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.11■□□□□ 0.65
SMIM11AP58511 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMIM11AP58511 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 MIR4767-201ENST00000582827 78 ntBASIC19.11■□□□□ 0.65
SMIM11AP58511 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.11■□□□□ 0.65
SMIM11AP58511 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SMIM11AP58511 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMIM11AP58511 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM11AP58511 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SMIM11AP58511 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.1■□□□□ 0.65
SMIM11AP58511 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 AC020907.5-201ENST00000624372 1936 ntBASIC19.1■□□□□ 0.65
SMIM11AP58511 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
SMIM11AP58511 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.1■□□□□ 0.65
SMIM11AP58511 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.1■□□□□ 0.65
SMIM11AP58511 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.1■□□□□ 0.65
SMIM11AP58511 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.1■□□□□ 0.65
SMIM11AP58511 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SMIM11AP58511 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SMIM11AP58511 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM11AP58511 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms