Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 AC124016.1-201ENST00000609552 612 ntBASIC17.22■□□□□ 0.35
RIPPLY3P57055 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 AC104076.2-201ENST00000448912 469 ntBASIC17.21■□□□□ 0.35
RIPPLY3P57055 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 LINC01238-205ENST00000567549 1107 ntBASIC17.21■□□□□ 0.35
RIPPLY3P57055 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.21■□□□□ 0.35
RIPPLY3P57055 AL591742.1-201ENST00000604433 565 ntBASIC17.21■□□□□ 0.35
RIPPLY3P57055 AC004263.2-201ENST00000617183 678 ntBASIC17.21■□□□□ 0.35
RIPPLY3P57055 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.21■□□□□ 0.35
RIPPLY3P57055 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIPPLY3P57055 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RIPPLY3P57055 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
RIPPLY3P57055 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RIPPLY3P57055 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 LINC01568-207ENST00000641790 1380 ntBASIC17.2■□□□□ 0.34
RIPPLY3P57055 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 AL355355.2-201ENST00000442321 338 ntBASIC17.2■□□□□ 0.34
RIPPLY3P57055 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 KRT18P16-201ENST00000510337 1294 ntBASIC17.2■□□□□ 0.34
RIPPLY3P57055 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIPPLY3P57055 OXCT2P1-201ENST00000447263 1535 ntBASIC17.2■□□□□ 0.34
RIPPLY3P57055 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 AC073508.3-201ENST00000619697 1419 ntBASIC17.2■□□□□ 0.34
RIPPLY3P57055 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.2■□□□□ 0.34
RIPPLY3P57055 KRT18P22-201ENST00000402024 1347 ntBASIC17.2■□□□□ 0.34
RIPPLY3P57055 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPPLY3P57055 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPPLY3P57055 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 AC239809.2-201ENST00000415381 517 ntBASIC17.19■□□□□ 0.34
RIPPLY3P57055 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 AC110285.5-201ENST00000611501 352 ntBASIC17.19■□□□□ 0.34
RIPPLY3P57055 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPPLY3P57055 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RIPPLY3P57055 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RIPPLY3P57055 AL139125.2-201ENST00000623134 1869 ntBASIC17.18■□□□□ 0.34
RIPPLY3P57055 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.18■□□□□ 0.34
RIPPLY3P57055 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.18■□□□□ 0.34
RIPPLY3P57055 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPPLY3P57055 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RIPPLY3P57055 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
RIPPLY3P57055 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms