Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN18P56856 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLDN18P56856 Z98882.1-201ENST00000622160 2253 ntBASIC18.61■□□□□ 0.57
CLDN18P56856 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN18P56856 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN18P56856 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN18P56856 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN18P56856 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CLDN18P56856 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN18P56856 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN18P56856 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN18P56856 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN18P56856 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN18P56856 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN18P56856 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CLDN18P56856 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN18P56856 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 AC010980.2-201ENST00000587099 1412 ntBASIC18.6■□□□□ 0.57
CLDN18P56856 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN18P56856 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.6■□□□□ 0.57
CLDN18P56856 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN18P56856 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN18P56856 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN18P56856 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN18P56856 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN18P56856 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN18P56856 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN18P56856 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 MIPEPP3-201ENST00000412105 444 ntBASIC18.59■□□□□ 0.57
CLDN18P56856 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN18P56856 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN18P56856 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN18P56856 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN18P56856 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN18P56856 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN18P56856 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CLDN18P56856 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLDN18P56856 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN18P56856 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.58■□□□□ 0.57
CLDN18P56856 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN18P56856 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN18P56856 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN18P56856 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN18P56856 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLDN18P56856 AC007322.3-201ENST00000426526 701 ntBASIC18.58■□□□□ 0.56
CLDN18P56856 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN18P56856 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN18P56856 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN18P56856 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.58■□□□□ 0.56
CLDN18P56856 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN18P56856 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN18P56856 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN18P56856 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN18P56856 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN18P56856 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN18P56856 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN18P56856 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN18P56856 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN18P56856 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN18P56856 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN18P56856 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN18P56856 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN18P56856 AC073210.2-201ENST00000430369 194 ntBASIC18.57■□□□□ 0.56
CLDN18P56856 AC069152.1-201ENST00000438030 544 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms