Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN8P56748 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN8P56748 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CLDN8P56748 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN8P56748 AC061975.6-201ENST00000579045 1553 ntBASIC19.78■□□□□ 0.76
CLDN8P56748 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN8P56748 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN8P56748 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CLDN8P56748 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN8P56748 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN8P56748 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN8P56748 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN8P56748 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN8P56748 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.77■□□□□ 0.76
CLDN8P56748 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN8P56748 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN8P56748 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CLDN8P56748 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN8P56748 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN8P56748 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN8P56748 AC027702.1-201ENST00000563810 1770 ntBASIC19.77■□□□□ 0.76
CLDN8P56748 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CLDN8P56748 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN8P56748 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLDN8P56748 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 AC011484.1-201ENST00000377652 1995 ntBASIC19.76■□□□□ 0.75
CLDN8P56748 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN8P56748 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN8P56748 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN8P56748 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN8P56748 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN8P56748 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN8P56748 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLDN8P56748 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN8P56748 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN8P56748 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN8P56748 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN8P56748 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN8P56748 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.75■□□□□ 0.75
CLDN8P56748 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN8P56748 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN8P56748 AL358852.1-201ENST00000623174 1268 ntBASIC19.75■□□□□ 0.75
CLDN8P56748 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN8P56748 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN8P56748 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CLDN8P56748 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN8P56748 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN8P56748 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN8P56748 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CLDN8P56748 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDN8P56748 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN8P56748 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN8P56748 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN8P56748 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CLDN8P56748 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN8P56748 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDN8P56748 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CLDN8P56748 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN8P56748 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN8P56748 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN8P56748 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN8P56748 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN8P56748 AC020907.5-201ENST00000624372 1936 ntBASIC19.74■□□□□ 0.75
CLDN8P56748 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN8P56748 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN8P56748 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN8P56748 POU5F1P4-201ENST00000413175 1085 ntBASIC19.73■□□□□ 0.75
CLDN8P56748 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN8P56748 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN8P56748 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms