Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
WNT3P56703 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
WNT3P56703 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.67■□□□□ 0.74
WNT3P56703 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.67■□□□□ 0.74
WNT3P56703 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.67■□□□□ 0.74
WNT3P56703 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.67■□□□□ 0.74
WNT3P56703 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.67■□□□□ 0.74
WNT3P56703 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.67■□□□□ 0.74
WNT3P56703 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
WNT3P56703 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.67■□□□□ 0.74
WNT3P56703 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
WNT3P56703 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 AC027702.1-201ENST00000563810 1770 ntBASIC19.66■□□□□ 0.74
WNT3P56703 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L2-201ENST00000561772 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
WNT3P56703 AL358852.1-201ENST00000623174 1268 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L6-201ENST00000626483 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L1-201ENST00000627662 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L8-201ENST00000629013 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L3-201ENST00000630187 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L7-201ENST00000630678 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 DUX4L5-201ENST00000630834 1275 ntBASIC19.66■□□□□ 0.74
WNT3P56703 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
WNT3P56703 AC007225.1-201ENST00000566331 1836 ntBASIC19.66■□□□□ 0.74
WNT3P56703 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.66■□□□□ 0.74
WNT3P56703 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
WNT3P56703 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
WNT3P56703 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.65■□□□□ 0.74
WNT3P56703 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
WNT3P56703 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
WNT3P56703 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.65■□□□□ 0.74
WNT3P56703 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.65■□□□□ 0.74
WNT3P56703 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.65■□□□□ 0.74
WNT3P56703 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
WNT3P56703 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
WNT3P56703 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
WNT3P56703 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
WNT3P56703 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.64■□□□□ 0.74
WNT3P56703 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
WNT3P56703 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
WNT3P56703 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
WNT3P56703 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
WNT3P56703 AC027612.3-201ENST00000413684 1047 ntBASIC19.64■□□□□ 0.73
WNT3P56703 AC034268.1-201ENST00000441047 882 ntBASIC19.64■□□□□ 0.73
WNT3P56703 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 AP004607.4-201ENST00000530158 1459 ntBASIC19.64■□□□□ 0.73
WNT3P56703 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
WNT3P56703 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.64■□□□□ 0.73
WNT3P56703 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
WNT3P56703 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.64■□□□□ 0.73
WNT3P56703 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
WNT3P56703 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
WNT3P56703 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
WNT3P56703 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
WNT3P56703 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms