Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRISP3P54108 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CRISP3P54108 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
CRISP3P54108 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.43■□□□□ 0.7
CRISP3P54108 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.43■□□□□ 0.7
CRISP3P54108 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.43■□□□□ 0.7
CRISP3P54108 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CRISP3P54108 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.43■□□□□ 0.7
CRISP3P54108 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.43■□□□□ 0.7
CRISP3P54108 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRISP3P54108 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CRISP3P54108 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CRISP3P54108 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.42■□□□□ 0.7
CRISP3P54108 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.42■□□□□ 0.7
CRISP3P54108 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.42■□□□□ 0.7
CRISP3P54108 AC053503.5-201ENST00000601508 636 ntBASIC19.42■□□□□ 0.7
CRISP3P54108 AL358852.1-201ENST00000623174 1268 ntBASIC19.42■□□□□ 0.7
CRISP3P54108 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.42■□□□□ 0.7
CRISP3P54108 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.42■□□□□ 0.7
CRISP3P54108 AC006128.1-201ENST00000624704 1661 ntBASIC19.42■□□□□ 0.7
CRISP3P54108 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.42■□□□□ 0.7
CRISP3P54108 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CRISP3P54108 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRISP3P54108 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CRISP3P54108 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CRISP3P54108 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.41■□□□□ 0.7
CRISP3P54108 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.41■□□□□ 0.7
CRISP3P54108 EEF1DP3-203ENST00000566025 782 ntBASIC19.41■□□□□ 0.7
CRISP3P54108 AC142381.2-201ENST00000566120 298 ntBASIC19.41■□□□□ 0.7
CRISP3P54108 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
CRISP3P54108 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
CRISP3P54108 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CRISP3P54108 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRISP3P54108 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CRISP3P54108 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CRISP3P54108 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CRISP3P54108 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CRISP3P54108 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CRISP3P54108 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.4■□□□□ 0.7
CRISP3P54108 TPRG1LP1-201ENST00000598702 760 ntBASIC19.4■□□□□ 0.7
CRISP3P54108 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CRISP3P54108 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.4■□□□□ 0.7
CRISP3P54108 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CRISP3P54108 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CRISP3P54108 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
CRISP3P54108 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.4■□□□□ 0.7
CRISP3P54108 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CRISP3P54108 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CRISP3P54108 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CRISP3P54108 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 LINC01006-201ENST00000333319 2292 ntBASIC19.39■□□□□ 0.69
CRISP3P54108 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.39■□□□□ 0.69
CRISP3P54108 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.39■□□□□ 0.69
CRISP3P54108 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.39■□□□□ 0.69
CRISP3P54108 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CRISP3P54108 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CRISP3P54108 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CRISP3P54108 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CRISP3P54108 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.38■□□□□ 0.69
CRISP3P54108 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CRISP3P54108 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms