Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A9P48067 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC6A9P48067 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC6A9P48067 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC6A9P48067 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC6A9P48067 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A9P48067 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A9P48067 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A9P48067 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A9P48067 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC6A9P48067 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A9P48067 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A9P48067 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SLC6A9P48067 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC6A9P48067 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC6A9P48067 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A9P48067 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A9P48067 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A9P48067 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A9P48067 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A9P48067 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC6A9P48067 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 AL049796.1-201ENST00000565336 1766 ntBASIC18.3■□□□□ 0.52
SLC6A9P48067 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC6A9P48067 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A9P48067 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A9P48067 MIR6821-201ENST00000617625 74 ntBASIC18.3■□□□□ 0.52
SLC6A9P48067 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC6A9P48067 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A9P48067 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A9P48067 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC6A9P48067 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A9P48067 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC6A9P48067 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 AC097381.1-201ENST00000429019 1296 ntBASIC18.29■□□□□ 0.52
SLC6A9P48067 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC6A9P48067 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A9P48067 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A9P48067 TPRG1LP1-201ENST00000598702 760 ntBASIC18.29■□□□□ 0.52
SLC6A9P48067 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC6A9P48067 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A9P48067 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC6A9P48067 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC6A9P48067 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A9P48067 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A9P48067 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A9P48067 AC079140.4-201ENST00000507448 529 ntBASIC18.28■□□□□ 0.52
SLC6A9P48067 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A9P48067 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A9P48067 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SLC6A9P48067 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC6A9P48067 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A9P48067 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A9P48067 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A9P48067 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC6A9P48067 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.27■□□□□ 0.52
SLC6A9P48067 MIR5787-201ENST00000611784 55 ntBASIC18.27■□□□□ 0.52
SLC6A9P48067 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A9P48067 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms