Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX5P45973 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX5P45973 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX5P45973 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CBX5P45973 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CBX5P45973 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.83■□□□□ 0.45
CBX5P45973 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX5P45973 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX5P45973 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX5P45973 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX5P45973 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBX5P45973 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.83■□□□□ 0.44
CBX5P45973 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.83■□□□□ 0.44
CBX5P45973 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.83■□□□□ 0.44
CBX5P45973 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CBX5P45973 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX5P45973 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 MIR6724-1-201ENST00000616420 92 ntBASIC17.82■□□□□ 0.44
CBX5P45973 MIR6724-2-201ENST00000616483 92 ntBASIC17.82■□□□□ 0.44
CBX5P45973 MIR6724-4-201ENST00000617390 92 ntBASIC17.82■□□□□ 0.44
CBX5P45973 MIR6724-3-201ENST00000622482 92 ntBASIC17.82■□□□□ 0.44
CBX5P45973 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX5P45973 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 AC006128.1-201ENST00000624704 1661 ntBASIC17.82■□□□□ 0.44
CBX5P45973 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CBX5P45973 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX5P45973 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX5P45973 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.81■□□□□ 0.44
CBX5P45973 AC003102.1-202ENST00000563394 1796 ntBASIC17.81■□□□□ 0.44
CBX5P45973 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CBX5P45973 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX5P45973 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX5P45973 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX5P45973 TSPY9P-201ENST00000440215 945 ntBASIC17.81■□□□□ 0.44
CBX5P45973 TSPY11P-201ENST00000442607 1045 ntBASIC17.81■□□□□ 0.44
CBX5P45973 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CBX5P45973 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CBX5P45973 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX5P45973 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.8■□□□□ 0.44
CBX5P45973 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.8■□□□□ 0.44
CBX5P45973 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.8■□□□□ 0.44
CBX5P45973 AC006455.2-201ENST00000429931 906 ntBASIC17.8■□□□□ 0.44
CBX5P45973 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CBX5P45973 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CBX5P45973 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CBX5P45973 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX5P45973 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.8■□□□□ 0.44
CBX5P45973 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CBX5P45973 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX5P45973 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX5P45973 AP004607.7-201ENST00000527152 1677 ntBASIC17.79■□□□□ 0.44
CBX5P45973 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX5P45973 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX5P45973 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CBX5P45973 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX5P45973 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX5P45973 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX5P45973 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX5P45973 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX5P45973 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CBX5P45973 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms