Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
SDHAP31040 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.61■□□□□ 0.57
SDHAP31040 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.61■□□□□ 0.57
SDHAP31040 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SDHAP31040 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SDHAP31040 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SDHAP31040 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 IRS3P-201ENST00000223076 1006 ntBASIC18.6■□□□□ 0.57
SDHAP31040 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.6■□□□□ 0.57
SDHAP31040 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHAP31040 AC005837.3-201ENST00000612163 286 ntBASIC18.6■□□□□ 0.57
SDHAP31040 AC008175.2-201ENST00000612840 297 ntBASIC18.6■□□□□ 0.57
SDHAP31040 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.6■□□□□ 0.57
SDHAP31040 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SDHAP31040 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHAP31040 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAP31040 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SDHAP31040 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.59■□□□□ 0.57
SDHAP31040 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 POU5F1P4-201ENST00000413175 1085 ntBASIC18.59■□□□□ 0.57
SDHAP31040 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 AC105265.2-201ENST00000467189 838 ntBASIC18.59■□□□□ 0.57
SDHAP31040 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.59■□□□□ 0.57
SDHAP31040 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.59■□□□□ 0.57
SDHAP31040 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAP31040 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SDHAP31040 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.58■□□□□ 0.57
SDHAP31040 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SDHAP31040 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.58■□□□□ 0.57
SDHAP31040 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SDHAP31040 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SDHAP31040 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SDHAP31040 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SDHAP31040 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.58■□□□□ 0.57
SDHAP31040 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SDHAP31040 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SDHAP31040 AC027612.3-201ENST00000413684 1047 ntBASIC18.58■□□□□ 0.56
SDHAP31040 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.58■□□□□ 0.56
SDHAP31040 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.58■□□□□ 0.56
SDHAP31040 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.58■□□□□ 0.56
SDHAP31040 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 AP005212.1-201ENST00000581547 1997 ntBASIC18.58■□□□□ 0.56
SDHAP31040 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SDHAP31040 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SDHAP31040 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 GABARAPL3-202ENST00000624044 1851 ntBASIC18.57■□□□□ 0.56
SDHAP31040 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.57■□□□□ 0.56
SDHAP31040 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SDHAP31040 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SDHAP31040 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SDHAP31040 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.57■□□□□ 0.56
SDHAP31040 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.57■□□□□ 0.56
SDHAP31040 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SDHAP31040 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SDHAP31040 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDHAP31040 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms