Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LCN1P31025 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.21■□□□□ 0.67
LCN1P31025 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.21■□□□□ 0.67
LCN1P31025 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.21■□□□□ 0.67
LCN1P31025 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.2■□□□□ 0.66
LCN1P31025 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LCN1P31025 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.2■□□□□ 0.66
LCN1P31025 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.2■□□□□ 0.66
LCN1P31025 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.2■□□□□ 0.66
LCN1P31025 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.2■□□□□ 0.66
LCN1P31025 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.2■□□□□ 0.66
LCN1P31025 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LCN1P31025 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.2■□□□□ 0.66
LCN1P31025 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LCN1P31025 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LCN1P31025 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCN1P31025 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.2■□□□□ 0.66
LCN1P31025 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LCN1P31025 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.19■□□□□ 0.66
LCN1P31025 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P31025 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P31025 KRT18P11-201ENST00000435214 1283 ntBASIC19.19■□□□□ 0.66
LCN1P31025 AC245052.3-201ENST00000450182 901 ntBASIC19.19■□□□□ 0.66
LCN1P31025 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.19■□□□□ 0.66
LCN1P31025 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P31025 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P31025 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCN1P31025 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.19■□□□□ 0.66
LCN1P31025 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.18■□□□□ 0.66
LCN1P31025 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LCN1P31025 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
LCN1P31025 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LCN1P31025 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LCN1P31025 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LCN1P31025 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
LCN1P31025 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 KRT18P5-201ENST00000436075 1291 ntBASIC19.18■□□□□ 0.66
LCN1P31025 KRT18P61-201ENST00000585825 1298 ntBASIC19.18■□□□□ 0.66
LCN1P31025 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 AC243732.1-201ENST00000612648 864 ntBASIC19.18■□□□□ 0.66
LCN1P31025 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.18■□□□□ 0.66
LCN1P31025 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCN1P31025 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LCN1P31025 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LCN1P31025 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LCN1P31025 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.17■□□□□ 0.66
LCN1P31025 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.17■□□□□ 0.66
LCN1P31025 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCN1P31025 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.16■□□□□ 0.66
LCN1P31025 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LCN1P31025 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LCN1P31025 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.16■□□□□ 0.66
LCN1P31025 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.16■□□□□ 0.66
LCN1P31025 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCN1P31025 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LCN1P31025 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.15■□□□□ 0.66
LCN1P31025 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCN1P31025 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCN1P31025 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LCN1P31025 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.15■□□□□ 0.66
LCN1P31025 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.15■□□□□ 0.66
LCN1P31025 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.15■□□□□ 0.66
LCN1P31025 SLC7A5P2-201ENST00000553010 536 ntBASIC19.15■□□□□ 0.66
LCN1P31025 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.15■□□□□ 0.66
LCN1P31025 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.15■□□□□ 0.66
LCN1P31025 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms