Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VARSP26640 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.36■□□□□ 0.85
VARSP26640 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.36■□□□□ 0.85
VARSP26640 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.36■□□□□ 0.85
VARSP26640 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.36■□□□□ 0.85
VARSP26640 CCDC92B-201ENST00000575506 885 ntBASIC20.36■□□□□ 0.85
VARSP26640 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.36■□□□□ 0.85
VARSP26640 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.36■□□□□ 0.85
VARSP26640 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
VARSP26640 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VARSP26640 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.36■□□□□ 0.85
VARSP26640 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
VARSP26640 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
VARSP26640 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
VARSP26640 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARSP26640 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARSP26640 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
VARSP26640 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
VARSP26640 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VARSP26640 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARSP26640 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARSP26640 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VARSP26640 KRT18P14-201ENST00000534205 1250 ntBASIC20.35■□□□□ 0.85
VARSP26640 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.35■□□□□ 0.85
VARSP26640 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.35■□□□□ 0.85
VARSP26640 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.35■□□□□ 0.85
VARSP26640 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARSP26640 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.35■□□□□ 0.85
VARSP26640 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VARSP26640 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.35■□□□□ 0.85
VARSP26640 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARSP26640 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.34■□□□□ 0.85
VARSP26640 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VARSP26640 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
VARSP26640 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
VARSP26640 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.34■□□□□ 0.85
VARSP26640 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.34■□□□□ 0.85
VARSP26640 AC079140.4-201ENST00000507448 529 ntBASIC20.34■□□□□ 0.85
VARSP26640 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.34■□□□□ 0.85
VARSP26640 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.34■□□□□ 0.85
VARSP26640 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.34■□□□□ 0.85
VARSP26640 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.34■□□□□ 0.85
VARSP26640 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VARSP26640 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARSP26640 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VARSP26640 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VARSP26640 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.33■□□□□ 0.85
VARSP26640 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.33■□□□□ 0.85
VARSP26640 TERF1P2-201ENST00000583350 1212 ntBASIC20.33■□□□□ 0.85
VARSP26640 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VARSP26640 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VARSP26640 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.33■□□□□ 0.84
VARSP26640 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VARSP26640 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
VARSP26640 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.32■□□□□ 0.84
VARSP26640 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VARSP26640 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.32■□□□□ 0.84
VARSP26640 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.32■□□□□ 0.84
VARSP26640 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.32■□□□□ 0.84
VARSP26640 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VARSP26640 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 AC007952.6-201ENST00000573168 2673 ntBASIC20.32■□□□□ 0.84
VARSP26640 AC003957.1-201ENST00000625108 2673 ntBASIC20.32■□□□□ 0.84
VARSP26640 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms