Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
PEPDP12955 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PEPDP12955 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PEPDP12955 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PEPDP12955 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PEPDP12955 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 AC016769.1-201ENST00000409132 1010 ntBASIC19.17■□□□□ 0.66
PEPDP12955 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.17■□□□□ 0.66
PEPDP12955 AC137761.2-201ENST00000561729 223 ntBASIC19.17■□□□□ 0.66
PEPDP12955 AC145350.3-201ENST00000569033 163 ntBASIC19.17■□□□□ 0.66
PEPDP12955 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 AC104187.1-201ENST00000607510 612 ntBASIC19.17■□□□□ 0.66
PEPDP12955 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
PEPDP12955 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PEPDP12955 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEPDP12955 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
PEPDP12955 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.16■□□□□ 0.66
PEPDP12955 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.16■□□□□ 0.66
PEPDP12955 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.16■□□□□ 0.66
PEPDP12955 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEPDP12955 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PEPDP12955 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PEPDP12955 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 AC073130.3-201ENST00000624389 2278 ntBASIC19.15■□□□□ 0.66
PEPDP12955 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.15■□□□□ 0.66
PEPDP12955 IKBKGP1-201ENST00000612193 1073 ntBASIC19.15■□□□□ 0.66
PEPDP12955 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
PEPDP12955 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEPDP12955 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.15■□□□□ 0.66
PEPDP12955 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PEPDP12955 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PEPDP12955 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PEPDP12955 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PEPDP12955 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PEPDP12955 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
PEPDP12955 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PEPDP12955 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 KRT18P11-201ENST00000435214 1283 ntBASIC19.14■□□□□ 0.65
PEPDP12955 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.14■□□□□ 0.65
PEPDP12955 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
PEPDP12955 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PEPDP12955 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PEPDP12955 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEPDP12955 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
PEPDP12955 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.13■□□□□ 0.65
PEPDP12955 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.13■□□□□ 0.65
PEPDP12955 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.13■□□□□ 0.65
PEPDP12955 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.13■□□□□ 0.65
PEPDP12955 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.13■□□□□ 0.65
PEPDP12955 AC053503.5-201ENST00000601508 636 ntBASIC19.13■□□□□ 0.65
PEPDP12955 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.13■□□□□ 0.65
PEPDP12955 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.13■□□□□ 0.65
PEPDP12955 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PEPDP12955 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PEPDP12955 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PEPDP12955 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PEPDP12955 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.12■□□□□ 0.65
PEPDP12955 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PEPDP12955 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PEPDP12955 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PEPDP12955 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PEPDP12955 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.12■□□□□ 0.65
PEPDP12955 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.12■□□□□ 0.65
PEPDP12955 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.12■□□□□ 0.65
PEPDP12955 EEF1DP3-203ENST00000566025 782 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms