Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 AC105265.2-201ENST00000467189 838 ntBASIC19.7■□□□□ 0.74
LAMP1P11279 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.7■□□□□ 0.74
LAMP1P11279 AP004607.4-201ENST00000530158 1459 ntBASIC19.7■□□□□ 0.74
LAMP1P11279 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMP1P11279 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LAMP1P11279 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMP1P11279 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMP1P11279 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMP1P11279 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LAMP1P11279 AC073314.1-201ENST00000568729 2216 ntBASIC19.7■□□□□ 0.74
LAMP1P11279 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LAMP1P11279 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.69■□□□□ 0.74
LAMP1P11279 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LAMP1P11279 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LAMP1P11279 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LAMP1P11279 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LAMP1P11279 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LAMP1P11279 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LAMP1P11279 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.69■□□□□ 0.74
LAMP1P11279 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.69■□□□□ 0.74
LAMP1P11279 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.69■□□□□ 0.74
LAMP1P11279 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LAMP1P11279 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LAMP1P11279 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LAMP1P11279 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMP1P11279 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMP1P11279 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.68■□□□□ 0.74
LAMP1P11279 AC079140.4-201ENST00000507448 529 ntBASIC19.68■□□□□ 0.74
LAMP1P11279 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LAMP1P11279 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LAMP1P11279 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.68■□□□□ 0.74
LAMP1P11279 AP005212.1-201ENST00000581547 1997 ntBASIC19.68■□□□□ 0.74
LAMP1P11279 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMP1P11279 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
LAMP1P11279 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.67■□□□□ 0.74
LAMP1P11279 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.67■□□□□ 0.74
LAMP1P11279 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LAMP1P11279 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.67■□□□□ 0.74
LAMP1P11279 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMP1P11279 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LAMP1P11279 KRT87P-202ENST00000534226 1464 ntBASIC19.67■□□□□ 0.74
LAMP1P11279 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.66■□□□□ 0.74
LAMP1P11279 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.66■□□□□ 0.74
LAMP1P11279 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LAMP1P11279 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMP1P11279 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.66■□□□□ 0.74
LAMP1P11279 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.66■□□□□ 0.74
LAMP1P11279 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMP1P11279 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMP1P11279 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
LAMP1P11279 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LAMP1P11279 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LAMP1P11279 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LAMP1P11279 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LAMP1P11279 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
LAMP1P11279 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.65■□□□□ 0.74
LAMP1P11279 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LAMP1P11279 GABARAPL3-202ENST00000624044 1851 ntBASIC19.65■□□□□ 0.74
LAMP1P11279 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.64■□□□□ 0.74
LAMP1P11279 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LAMP1P11279 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LAMP1P11279 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LAMP1P11279 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 MIR638-201ENST00000385237 100 ntBASIC19.64■□□□□ 0.73
LAMP1P11279 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 AC027612.3-201ENST00000413684 1047 ntBASIC19.64■□□□□ 0.73
LAMP1P11279 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.64■□□□□ 0.73
LAMP1P11279 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.64■□□□□ 0.73
LAMP1P11279 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms