Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MMP2P08253 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
MMP2P08253 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.99■□□□□ 0.95
MMP2P08253 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP2P08253 AC011767.1-201ENST00000617410 1153 ntBASIC20.99■□□□□ 0.95
MMP2P08253 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP2P08253 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
MMP2P08253 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP2P08253 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP2P08253 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP2P08253 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MMP2P08253 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.98■□□□□ 0.95
MMP2P08253 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MMP2P08253 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MMP2P08253 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.98■□□□□ 0.95
MMP2P08253 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.98■□□□□ 0.95
MMP2P08253 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.98■□□□□ 0.95
MMP2P08253 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MMP2P08253 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP2P08253 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
MMP2P08253 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP2P08253 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MMP2P08253 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.97■□□□□ 0.95
MMP2P08253 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP2P08253 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP2P08253 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MMP2P08253 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP2P08253 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP2P08253 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MMP2P08253 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MMP2P08253 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MMP2P08253 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP2P08253 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP2P08253 AC121338.2-201ENST00000622535 1744 ntBASIC20.96■□□□□ 0.95
MMP2P08253 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP2P08253 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP2P08253 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.96■□□□□ 0.95
MMP2P08253 TERF1P5-201ENST00000477545 1207 ntBASIC20.96■□□□□ 0.95
MMP2P08253 DUX4L16-201ENST00000555130 1264 ntBASIC20.96■□□□□ 0.95
MMP2P08253 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP2P08253 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP2P08253 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP2P08253 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP2P08253 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP2P08253 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
MMP2P08253 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP2P08253 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP2P08253 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP2P08253 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP2P08253 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP2P08253 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP2P08253 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
MMP2P08253 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP2P08253 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
MMP2P08253 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP2P08253 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP2P08253 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP2P08253 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
MMP2P08253 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.94■□□□□ 0.94
MMP2P08253 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 AC011484.1-201ENST00000377652 1995 ntBASIC20.94■□□□□ 0.94
MMP2P08253 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP2P08253 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
MMP2P08253 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP2P08253 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MMP2P08253 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP2P08253 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP2P08253 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP2P08253 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms