Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.25■□□□□ 0.35
CTSDP07339 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTSDP07339 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSDP07339 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSDP07339 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSDP07339 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSDP07339 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CTSDP07339 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.24■□□□□ 0.35
CTSDP07339 UNC93B8-201ENST00000511903 705 ntBASIC17.24■□□□□ 0.35
CTSDP07339 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTSDP07339 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTSDP07339 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSDP07339 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 AL512408.1-201ENST00000569378 2000 ntBASIC17.23■□□□□ 0.35
CTSDP07339 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSDP07339 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CTSDP07339 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTSDP07339 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSDP07339 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSDP07339 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.23■□□□□ 0.35
CTSDP07339 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CTSDP07339 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 RNF165-205ENST00000588679 2904 ntBASIC17.23■□□□□ 0.35
CTSDP07339 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTSDP07339 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSDP07339 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.22■□□□□ 0.35
CTSDP07339 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CTSDP07339 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.22■□□□□ 0.35
CTSDP07339 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.22■□□□□ 0.35
CTSDP07339 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.22■□□□□ 0.35
CTSDP07339 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTSDP07339 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTSDP07339 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CTSDP07339 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSDP07339 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CTSDP07339 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
CTSDP07339 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSDP07339 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTSDP07339 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSDP07339 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTSDP07339 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 GUSBP5-201ENST00000418136 578 ntBASIC17.21■□□□□ 0.35
CTSDP07339 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.21■□□□□ 0.35
CTSDP07339 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.21■□□□□ 0.35
CTSDP07339 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSDP07339 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSDP07339 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTSDP07339 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSDP07339 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSDP07339 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CTSDP07339 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTSDP07339 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 FP700111.2-201ENST00000619190 1892 ntBASIC17.2■□□□□ 0.34
CTSDP07339 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.2■□□□□ 0.34
CTSDP07339 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.2■□□□□ 0.34
CTSDP07339 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms