Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNSO60931 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.52■□□□□ 0.72
CTNSO60931 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.52■□□□□ 0.72
CTNSO60931 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNSO60931 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.52■□□□□ 0.72
CTNSO60931 AC231657.2-201ENST00000624556 255 ntBASIC19.52■□□□□ 0.72
CTNSO60931 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CTNSO60931 AL049796.1-201ENST00000565336 1766 ntBASIC19.52■□□□□ 0.71
CTNSO60931 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTNSO60931 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CTNSO60931 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CTNSO60931 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.51■□□□□ 0.71
CTNSO60931 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNSO60931 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CTNSO60931 AC073111.5-205ENST00000641717 521 ntBASIC19.51■□□□□ 0.71
CTNSO60931 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.51■□□□□ 0.71
CTNSO60931 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNSO60931 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.51■□□□□ 0.71
CTNSO60931 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNSO60931 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNSO60931 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTNSO60931 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CTNSO60931 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.5■□□□□ 0.71
CTNSO60931 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.5■□□□□ 0.71
CTNSO60931 CDCA4P2-201ENST00000441182 718 ntBASIC19.5■□□□□ 0.71
CTNSO60931 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.5■□□□□ 0.71
CTNSO60931 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.5■□□□□ 0.71
CTNSO60931 AC007322.4-201ENST00000509611 723 ntBASIC19.5■□□□□ 0.71
CTNSO60931 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNSO60931 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.5■□□□□ 0.71
CTNSO60931 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNSO60931 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNSO60931 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.5■□□□□ 0.71
CTNSO60931 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTNSO60931 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNSO60931 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNSO60931 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTNSO60931 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNSO60931 AC091799.1-201ENST00000422823 811 ntBASIC19.49■□□□□ 0.71
CTNSO60931 AC007322.1-201ENST00000426983 750 ntBASIC19.49■□□□□ 0.71
CTNSO60931 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTNSO60931 CNN2P6-201ENST00000439038 900 ntBASIC19.49■□□□□ 0.71
CTNSO60931 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNSO60931 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNSO60931 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTNSO60931 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNSO60931 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTNSO60931 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.49■□□□□ 0.71
CTNSO60931 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNSO60931 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNSO60931 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNSO60931 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CTNSO60931 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.48■□□□□ 0.71
CTNSO60931 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTNSO60931 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNSO60931 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.48■□□□□ 0.71
CTNSO60931 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.48■□□□□ 0.71
CTNSO60931 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.48■□□□□ 0.71
CTNSO60931 AL591742.1-201ENST00000604433 565 ntBASIC19.48■□□□□ 0.71
CTNSO60931 PKD1P6-201ENST00000343738 4769 ntBASIC19.48■□□□□ 0.71
CTNSO60931 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNSO60931 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.48■□□□□ 0.71
CTNSO60931 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNSO60931 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.48■□□□□ 0.71
CTNSO60931 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNSO60931 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 AC007375.3-201ENST00000600936 2314 ntBASIC19.47■□□□□ 0.71
CTNSO60931 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 AC026185.1-201ENST00000445748 174 ntBASIC19.47■□□□□ 0.71
CTNSO60931 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNSO60931 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.47■□□□□ 0.71
CTNSO60931 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNSO60931 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CTNSO60931 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNSO60931 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNSO60931 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms