Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PFDN1O60925 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PFDN1O60925 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PFDN1O60925 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 AP000997.3-201ENST00000623333 2250 ntBASIC18.65■□□□□ 0.58
PFDN1O60925 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PFDN1O60925 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PFDN1O60925 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
PFDN1O60925 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.64■□□□□ 0.58
PFDN1O60925 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PFDN1O60925 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.64■□□□□ 0.57
PFDN1O60925 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PFDN1O60925 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PFDN1O60925 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.64■□□□□ 0.57
PFDN1O60925 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
PFDN1O60925 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PFDN1O60925 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN1O60925 AC093503.3-201ENST00000624917 2352 ntBASIC18.63■□□□□ 0.57
PFDN1O60925 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 PKD1P1-201ENST00000458669 6805 ntBASIC18.63■□□□□ 0.57
PFDN1O60925 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PFDN1O60925 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.63■□□□□ 0.57
PFDN1O60925 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.63■□□□□ 0.57
PFDN1O60925 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.63■□□□□ 0.57
PFDN1O60925 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.63■□□□□ 0.57
PFDN1O60925 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.63■□□□□ 0.57
PFDN1O60925 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN1O60925 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN1O60925 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
PFDN1O60925 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PFDN1O60925 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PFDN1O60925 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PFDN1O60925 CAHM-201ENST00000604200 896 ntBASIC18.62■□□□□ 0.57
PFDN1O60925 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PFDN1O60925 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN1O60925 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PFDN1O60925 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN1O60925 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.62■□□□□ 0.57
PFDN1O60925 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PFDN1O60925 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PFDN1O60925 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PFDN1O60925 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN1O60925 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN1O60925 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.61■□□□□ 0.57
PFDN1O60925 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN1O60925 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN1O60925 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN1O60925 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms