Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NPHS1O60500 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NPHS1O60500 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.27■□□□□ 0.84
NPHS1O60500 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NPHS1O60500 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.27■□□□□ 0.84
NPHS1O60500 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPHS1O60500 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.27■□□□□ 0.84
NPHS1O60500 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPHS1O60500 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.27■□□□□ 0.84
NPHS1O60500 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.27■□□□□ 0.84
NPHS1O60500 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.27■□□□□ 0.84
NPHS1O60500 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.27■□□□□ 0.84
NPHS1O60500 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.27■□□□□ 0.84
NPHS1O60500 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPHS1O60500 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.27■□□□□ 0.84
NPHS1O60500 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
NPHS1O60500 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
NPHS1O60500 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPHS1O60500 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPHS1O60500 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 EEF1DP3-203ENST00000566025 782 ntBASIC20.26■□□□□ 0.83
NPHS1O60500 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.26■□□□□ 0.83
NPHS1O60500 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.26■□□□□ 0.83
NPHS1O60500 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 AC011484.1-201ENST00000377652 1995 ntBASIC20.26■□□□□ 0.83
NPHS1O60500 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.26■□□□□ 0.83
NPHS1O60500 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 FP700111.2-201ENST00000619190 1892 ntBASIC20.26■□□□□ 0.83
NPHS1O60500 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 AL162377.1-201ENST00000618844 1793 ntBASIC20.26■□□□□ 0.83
NPHS1O60500 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPHS1O60500 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NPHS1O60500 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.25■□□□□ 0.83
NPHS1O60500 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.25■□□□□ 0.83
NPHS1O60500 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.25■□□□□ 0.83
NPHS1O60500 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 AC008764.7-201ENST00000593779 1081 ntBASIC20.25■□□□□ 0.83
NPHS1O60500 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 AC053503.5-201ENST00000601508 636 ntBASIC20.25■□□□□ 0.83
NPHS1O60500 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.25■□□□□ 0.83
NPHS1O60500 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.25■□□□□ 0.83
NPHS1O60500 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.25■□□□□ 0.83
NPHS1O60500 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPHS1O60500 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPHS1O60500 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.25■□□□□ 0.83
NPHS1O60500 TSPY26P-201ENST00000476365 1326 ntBASIC20.25■□□□□ 0.83
NPHS1O60500 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.24■□□□□ 0.83
NPHS1O60500 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPHS1O60500 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPHS1O60500 AC099791.1-201ENST00000416440 715 ntBASIC20.24■□□□□ 0.83
NPHS1O60500 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.24■□□□□ 0.83
NPHS1O60500 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.24■□□□□ 0.83
NPHS1O60500 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.24■□□□□ 0.83
NPHS1O60500 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.24■□□□□ 0.83
NPHS1O60500 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPHS1O60500 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPHS1O60500 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPHS1O60500 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.24■□□□□ 0.83
NPHS1O60500 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NPHS1O60500 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.23■□□□□ 0.83
NPHS1O60500 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.23■□□□□ 0.83
NPHS1O60500 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.23■□□□□ 0.83
NPHS1O60500 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.23■□□□□ 0.83
NPHS1O60500 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.23■□□□□ 0.83
NPHS1O60500 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
NPHS1O60500 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.23■□□□□ 0.83
NPHS1O60500 AP004607.4-201ENST00000530158 1459 ntBASIC20.23■□□□□ 0.83
NPHS1O60500 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.23■□□□□ 0.83
NPHS1O60500 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPHS1O60500 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.22■□□□□ 0.83
NPHS1O60500 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms