Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.42■■□□□ 1.18
SOX1O00570 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SOX1O00570 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.42■■□□□ 1.18
SOX1O00570 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.42■■□□□ 1.18
SOX1O00570 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 AP000525.1-201ENST00000608286 694 ntBASIC22.42■■□□□ 1.18
SOX1O00570 AC120498.8-201ENST00000614275 531 ntBASIC22.42■■□□□ 1.18
SOX1O00570 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SOX1O00570 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.42■■□□□ 1.18
SOX1O00570 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SOX1O00570 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SOX1O00570 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SOX1O00570 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SOX1O00570 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.41■■□□□ 1.18
SOX1O00570 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SOX1O00570 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
SOX1O00570 CRYGFP-201ENST00000418459 633 ntBASIC22.41■■□□□ 1.18
SOX1O00570 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SOX1O00570 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.41■■□□□ 1.18
SOX1O00570 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SOX1O00570 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.41■■□□□ 1.18
SOX1O00570 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
SOX1O00570 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.41■■□□□ 1.18
SOX1O00570 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SOX1O00570 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.4■■□□□ 1.18
SOX1O00570 KRT18P48-201ENST00000434763 852 ntBASIC22.4■■□□□ 1.18
SOX1O00570 SLC25A3P1-201ENST00000443844 931 ntBASIC22.4■■□□□ 1.18
SOX1O00570 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.4■■□□□ 1.18
SOX1O00570 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.4■■□□□ 1.18
SOX1O00570 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SOX1O00570 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SOX1O00570 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.4■■□□□ 1.18
SOX1O00570 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX1O00570 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SOX1O00570 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.39■■□□□ 1.18
SOX1O00570 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.18
SOX1O00570 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
SOX1O00570 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.39■■□□□ 1.17
SOX1O00570 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SOX1O00570 CYP2D8P-201ENST00000433633 1490 ntBASIC22.39■■□□□ 1.17
SOX1O00570 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SOX1O00570 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOX1O00570 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
SOX1O00570 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.38■■□□□ 1.17
SOX1O00570 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SOX1O00570 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.38■■□□□ 1.17
SOX1O00570 CDV3P1-201ENST00000471403 739 ntBASIC22.38■■□□□ 1.17
SOX1O00570 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.38■■□□□ 1.17
SOX1O00570 AF186192.3-201ENST00000583427 947 ntBASIC22.38■■□□□ 1.17
SOX1O00570 AC091076.1-201ENST00000610741 619 ntBASIC22.38■■□□□ 1.17
SOX1O00570 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.38■■□□□ 1.17
SOX1O00570 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.38■■□□□ 1.17
SOX1O00570 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOX1O00570 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOX1O00570 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.37■■□□□ 1.17
SOX1O00570 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 AP003733.4-201ENST00000623785 1697 ntBASIC22.37■■□□□ 1.17
SOX1O00570 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.37■■□□□ 1.17
SOX1O00570 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 MIR1238-201ENST00000408483 83 ntBASIC22.37■■□□□ 1.17
SOX1O00570 FAM197Y1-201ENST00000421178 764 ntBASIC22.37■■□□□ 1.17
SOX1O00570 DUSP5P1-201ENST00000441325 1139 ntBASIC22.37■■□□□ 1.17
SOX1O00570 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.37■■□□□ 1.17
SOX1O00570 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 AC006011.2-201ENST00000621313 1158 ntBASIC22.37■■□□□ 1.17
SOX1O00570 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.37■■□□□ 1.17
SOX1O00570 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX1O00570 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.37■■□□□ 1.17
SOX1O00570 KRT18P22-201ENST00000402024 1347 ntBASIC22.36■■□□□ 1.17
SOX1O00570 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.36■■□□□ 1.17
SOX1O00570 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOX1O00570 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOX1O00570 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOX1O00570 AL031963.3-201ENST00000606441 850 ntBASIC22.36■■□□□ 1.17
SOX1O00570 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms