Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
HFM1A2PYH4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
HFM1A2PYH4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 CDV3P1-201ENST00000471403 739 ntBASIC30.98■■■□□ 2.55
HFM1A2PYH4 AC100791.3-201ENST00000617619 330 ntBASIC30.98■■■□□ 2.55
HFM1A2PYH4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
HFM1A2PYH4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC30.97■■■□□ 2.55
HFM1A2PYH4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
HFM1A2PYH4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
HFM1A2PYH4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
HFM1A2PYH4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.97■■■□□ 2.55
HFM1A2PYH4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.97■■■□□ 2.55
HFM1A2PYH4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.97■■■□□ 2.55
HFM1A2PYH4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
HFM1A2PYH4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
HFM1A2PYH4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 MYC-209ENST00000641252 345 ntBASIC30.96■■■□□ 2.55
HFM1A2PYH4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
HFM1A2PYH4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
HFM1A2PYH4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC30.96■■■□□ 2.55
HFM1A2PYH4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
HFM1A2PYH4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
HFM1A2PYH4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
HFM1A2PYH4 LINC00565-201ENST00000562710 2331 ntBASIC30.95■■■□□ 2.55
HFM1A2PYH4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
HFM1A2PYH4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
HFM1A2PYH4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
HFM1A2PYH4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
HFM1A2PYH4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
HFM1A2PYH4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC30.95■■■□□ 2.54
HFM1A2PYH4 AL024507.2-201ENST00000606070 2574 ntBASIC30.95■■■□□ 2.54
HFM1A2PYH4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HFM1A2PYH4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC30.94■■■□□ 2.54
HFM1A2PYH4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
HFM1A2PYH4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HFM1A2PYH4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HFM1A2PYH4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC30.94■■■□□ 2.54
HFM1A2PYH4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC30.94■■■□□ 2.54
HFM1A2PYH4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.94■■■□□ 2.54
HFM1A2PYH4 AC116050.2-201ENST00000612102 1779 ntBASIC30.94■■■□□ 2.54
HFM1A2PYH4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
HFM1A2PYH4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HFM1A2PYH4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC30.94■■■□□ 2.54
HFM1A2PYH4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
HFM1A2PYH4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC30.93■■■□□ 2.54
HFM1A2PYH4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HFM1A2PYH4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HFM1A2PYH4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.93■■■□□ 2.54
HFM1A2PYH4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HFM1A2PYH4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HFM1A2PYH4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
HFM1A2PYH4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.92■■■□□ 2.54
HFM1A2PYH4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC30.92■■■□□ 2.54
HFM1A2PYH4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HFM1A2PYH4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.92■■■□□ 2.54
HFM1A2PYH4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
HFM1A2PYH4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
HFM1A2PYH4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
HFM1A2PYH4 CYP21A1P-202ENST00000354927 1481 ntBASIC30.91■■■□□ 2.54
HFM1A2PYH4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HFM1A2PYH4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC30.91■■■□□ 2.54
HFM1A2PYH4 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.91■■■□□ 2.54
HFM1A2PYH4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
HFM1A2PYH4 CYP2T3P-201ENST00000601990 817 ntBASIC30.91■■■□□ 2.54
HFM1A2PYH4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HFM1A2PYH4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
HFM1A2PYH4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.91■■■□□ 2.54
HFM1A2PYH4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
HFM1A2PYH4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HFM1A2PYH4 BX276092.2-201ENST00000417668 665 ntBASIC30.9■■■□□ 2.54
HFM1A2PYH4 AC083880.1-201ENST00000608266 535 ntBASIC30.9■■■□□ 2.54
HFM1A2PYH4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
HFM1A2PYH4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HFM1A2PYH4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
HFM1A2PYH4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
HFM1A2PYH4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
HFM1A2PYH4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HFM1A2PYH4 KRT17P1-201ENST00000399211 1546 ntBASIC30.89■■■□□ 2.54
HFM1A2PYH4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC30.89■■■□□ 2.54
HFM1A2PYH4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC30.89■■■□□ 2.54
HFM1A2PYH4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
HFM1A2PYH4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
HFM1A2PYH4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
HFM1A2PYH4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
HFM1A2PYH4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
HFM1A2PYH4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms