Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 HR-201ENST00000312841 5351 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 AP000974.1-201ENST00000623909 2387 ntBASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 RNF166-209ENST00000567844 633 ntTSL 5 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 AC073314.1-201ENST00000568729 2216 ntBASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 MFF-203ENST00000349901 1716 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAV22A0A0B4J277 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 AL049796.1-201ENST00000565336 1766 ntBASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 USF2-207ENST00000595068 1612 ntTSL 5 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAV22A0A0B4J277 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms