Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 AC005332.8-201ENST00000622750 2735 ntBASIC15.18■□□□□ 0.02
COX11Q9Y6N1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
COX11Q9Y6N1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX11Q9Y6N1 PCDHAC2-203ENST00000615316 3011 ntBASIC15.17■□□□□ 0.02
COX11Q9Y6N1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX11Q9Y6N1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 MIR3621-201ENST00000580529 85 ntBASIC15.15■□□□□ 0.02
COX11Q9Y6N1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COX11Q9Y6N1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms