Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 GPX1P1-201ENST00000388829 606 ntBASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.21■□□□□ 0.67
HRH3Q9Y5N1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HRH3Q9Y5N1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HRH3Q9Y5N1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 AC083906.2-201ENST00000511578 360 ntBASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 MYCNOS-205ENST00000641950 531 ntBASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.18■□□□□ 0.66
HRH3Q9Y5N1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HRH3Q9Y5N1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms