Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 AP005212.1-201ENST00000581547 1997 ntBASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 AC027612.3-201ENST00000413684 1047 ntBASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA9Q9Y5H5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 ZNRF2P3-201ENST00000424200 374 ntBASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA9Q9Y5H5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.02■□□□□ 0.79
PCDHA9Q9Y5H5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHA9Q9Y5H5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PCDHA9Q9Y5H5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.02■□□□□ 0.79
PCDHA9Q9Y5H5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA9Q9Y5H5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 AC006128.1-201ENST00000624704 1661 ntBASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 AC073314.1-201ENST00000568729 2216 ntBASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA9Q9Y5H5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHA9Q9Y5H5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 PLK5-205ENST00000642079 1969 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms