Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 OR2A1-AS1-201ENST00000462305 773 ntBASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPN23Q9H3S7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTPN23Q9H3S7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC31.64■■■□□ 2.65
PTPN23Q9H3S7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC31.64■■■□□ 2.65
PTPN23Q9H3S7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC31.64■■■□□ 2.65
PTPN23Q9H3S7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC31.64■■■□□ 2.65
PTPN23Q9H3S7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PTPN23Q9H3S7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
PTPN23Q9H3S7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
PTPN23Q9H3S7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 TMEM191A-211ENST00000637163 1067 ntBASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 AC133561.1-201ENST00000568600 2415 ntBASIC31.62■■■□□ 2.65
PTPN23Q9H3S7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 AC097658.1-201ENST00000475555 843 ntBASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.61■■■□□ 2.65
PTPN23Q9H3S7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 MCRIP2P1-201ENST00000394346 511 ntBASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 ITM2C-210ENST00000620962 501 ntBASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 CYP21A1P-202ENST00000354927 1481 ntBASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN23Q9H3S7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPN23Q9H3S7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 AC098590.1-201ENST00000468126 897 ntBASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 AC105020.6-201ENST00000621523 1217 ntBASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN23Q9H3S7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
PTPN23Q9H3S7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPN23Q9H3S7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPN23Q9H3S7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC31.57■■■□□ 2.64
PTPN23Q9H3S7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms