Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 AC053503.5-201ENST00000601508 636 ntBASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC68Q9H2F9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 EEF1DP3-203ENST00000566025 782 ntBASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 LINC02228-203ENST00000641970 1355 ntBASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 KRT87P-202ENST00000534226 1464 ntBASIC20.8■□□□□ 0.92
CCDC68Q9H2F9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC68Q9H2F9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC68Q9H2F9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 AC008175.2-201ENST00000612840 297 ntBASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC68Q9H2F9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC68Q9H2F9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CCDC68Q9H2F9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms