Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 AC004448.1-201ENST00000458332 883 ntBASIC16.84■□□□□ 0.29
NKX6-2Q9C056 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-2Q9C056 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NKX6-2Q9C056 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NKX6-2Q9C056 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NKX6-2Q9C056 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 FZD10-202ENST00000539839 3282 ntBASIC16.83■□□□□ 0.28
NKX6-2Q9C056 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-2Q9C056 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 SPCS2P3-201ENST00000500401 656 ntBASIC16.82■□□□□ 0.28
NKX6-2Q9C056 AL592293.1-201ENST00000502889 1188 ntBASIC16.82■□□□□ 0.28
NKX6-2Q9C056 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-2Q9C056 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 AC019171.1-201ENST00000601251 1056 ntBASIC16.81■□□□□ 0.28
NKX6-2Q9C056 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-2Q9C056 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 MIR7108-201ENST00000614319 87 ntBASIC16.8■□□□□ 0.28
NKX6-2Q9C056 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-2Q9C056 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms