Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.01■□□□□ 0.47
GFI1Q99684 AC092171.4-201ENST00000609130 632 ntBASIC18.01■□□□□ 0.47
GFI1Q99684 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GFI1Q99684 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.01■□□□□ 0.47
GFI1Q99684 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFI1Q99684 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.01■□□□□ 0.47
GFI1Q99684 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
GFI1Q99684 SYT6-210ENST00000641643 1587 ntBASIC18■□□□□ 0.47
GFI1Q99684 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GFI1Q99684 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18■□□□□ 0.47
GFI1Q99684 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18■□□□□ 0.47
GFI1Q99684 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18■□□□□ 0.47
GFI1Q99684 OR2A1-AS1-204ENST00000470435 602 ntBASIC18■□□□□ 0.47
GFI1Q99684 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18■□□□□ 0.47
GFI1Q99684 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18■□□□□ 0.47
GFI1Q99684 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18■□□□□ 0.47
GFI1Q99684 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
GFI1Q99684 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.99■□□□□ 0.47
GFI1Q99684 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
GFI1Q99684 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 BX005040.4-201ENST00000637145 1518 ntBASIC17.99■□□□□ 0.47
GFI1Q99684 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.99■□□□□ 0.47
GFI1Q99684 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.99■□□□□ 0.47
GFI1Q99684 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.99■□□□□ 0.47
GFI1Q99684 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.99■□□□□ 0.47
GFI1Q99684 AC136469.2-201ENST00000623944 1028 ntBASIC17.99■□□□□ 0.47
GFI1Q99684 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
GFI1Q99684 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.99■□□□□ 0.47
GFI1Q99684 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFI1Q99684 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GFI1Q99684 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.98■□□□□ 0.47
GFI1Q99684 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.98■□□□□ 0.47
GFI1Q99684 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
GFI1Q99684 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.98■□□□□ 0.47
GFI1Q99684 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.98■□□□□ 0.47
GFI1Q99684 AL138724.1-201ENST00000606771 1088 ntBASIC17.98■□□□□ 0.47
GFI1Q99684 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.98■□□□□ 0.47
GFI1Q99684 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
GFI1Q99684 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFI1Q99684 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
GFI1Q99684 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
GFI1Q99684 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GFI1Q99684 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.97■□□□□ 0.47
GFI1Q99684 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFI1Q99684 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.97■□□□□ 0.47
GFI1Q99684 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GFI1Q99684 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.96■□□□□ 0.47
GFI1Q99684 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.96■□□□□ 0.47
GFI1Q99684 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFI1Q99684 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.96■□□□□ 0.47
GFI1Q99684 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms