Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 AL355355.2-201ENST00000442321 338 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 UNC93B2-201ENST00000285383 730 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 AC063952.2-201ENST00000498792 1227 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CKBP1-201ENST00000565489 1086 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 KRT16P2-201ENST00000414673 1423 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 FAM197Y1-201ENST00000421178 764 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 HLA-J-203ENST00000494367 1087 ntBASIC6.48□□□□□ -1.37
HMCN1Q96RW7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HMCN1Q96RW7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 RN7SL510P-201ENST00000581311 263 ntBASIC6.47□□□□□ -1.37
HMCN1Q96RW7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AC100791.3-201ENST00000617619 330 ntBASIC6.47□□□□□ -1.37
HMCN1Q96RW7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AL671277.2-201ENST00000458060 996 ntBASIC6.47□□□□□ -1.37
HMCN1Q96RW7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AL022342.1-201ENST00000400363 863 ntBASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AK4P3-201ENST00000418260 669 ntBASIC6.47□□□□□ -1.37
HMCN1Q96RW7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 AC008622.2-201ENST00000617006 1229 ntBASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMCN1Q96RW7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC6.46□□□□□ -1.37
HMCN1Q96RW7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMCN1Q96RW7 HTR7P1-201ENST00000538670 1336 ntBASIC6.46□□□□□ -1.38
HMCN1Q96RW7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMCN1Q96RW7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMCN1Q96RW7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms