Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 AC120498.10-201ENST00000621827 505 ntBASIC24.68■■□□□ 1.54
NEK1Q96PY6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.68■■□□□ 1.54
NEK1Q96PY6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 PLK5-205ENST00000642079 1969 ntBASIC24.67■■□□□ 1.54
NEK1Q96PY6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.67■■□□□ 1.54
NEK1Q96PY6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NEK1Q96PY6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
NEK1Q96PY6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.67■■□□□ 1.54
NEK1Q96PY6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.67■■□□□ 1.54
NEK1Q96PY6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NEK1Q96PY6 NTF6G-201ENST00000591094 616 ntBASIC24.67■■□□□ 1.54
NEK1Q96PY6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
NEK1Q96PY6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NEK1Q96PY6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.67■■□□□ 1.54
NEK1Q96PY6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NEK1Q96PY6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NEK1Q96PY6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NEK1Q96PY6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NEK1Q96PY6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NEK1Q96PY6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
NEK1Q96PY6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NEK1Q96PY6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.66■■□□□ 1.54
NEK1Q96PY6 KRT19P1-201ENST00000405746 1186 ntBASIC24.66■■□□□ 1.54
NEK1Q96PY6 KRT18P20-201ENST00000548986 1279 ntBASIC24.66■■□□□ 1.54
NEK1Q96PY6 RARRES2P11-201ENST00000635158 484 ntBASIC24.66■■□□□ 1.54
NEK1Q96PY6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.66■■□□□ 1.54
NEK1Q96PY6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
NEK1Q96PY6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
NEK1Q96PY6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
NEK1Q96PY6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.66■■□□□ 1.54
NEK1Q96PY6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.65■■□□□ 1.54
NEK1Q96PY6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.65■■□□□ 1.54
NEK1Q96PY6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NEK1Q96PY6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.64■■□□□ 1.54
NEK1Q96PY6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NEK1Q96PY6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NEK1Q96PY6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
NEK1Q96PY6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NEK1Q96PY6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NEK1Q96PY6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.64■■□□□ 1.54
NEK1Q96PY6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NEK1Q96PY6 AC121338.2-201ENST00000622535 1744 ntBASIC24.64■■□□□ 1.54
NEK1Q96PY6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
NEK1Q96PY6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.64■■□□□ 1.53
NEK1Q96PY6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.64■■□□□ 1.53
NEK1Q96PY6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NEK1Q96PY6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NEK1Q96PY6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.63■■□□□ 1.53
NEK1Q96PY6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.63■■□□□ 1.53
NEK1Q96PY6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.63■■□□□ 1.53
NEK1Q96PY6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
NEK1Q96PY6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NEK1Q96PY6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
NEK1Q96PY6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
NEK1Q96PY6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.62■■□□□ 1.53
NEK1Q96PY6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NEK1Q96PY6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms