Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.63■□□□□ 0.89
CFAP54Q96N23 DUX4L26-201ENST00000489078 1255 ntBASIC20.63■□□□□ 0.89
CFAP54Q96N23 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CFAP54Q96N23 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP54Q96N23 DUSP8P3-201ENST00000399571 1760 ntBASIC20.62■□□□□ 0.89
CFAP54Q96N23 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP54Q96N23 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP54Q96N23 AC026471.5-201ENST00000615068 467 ntBASIC20.62■□□□□ 0.89
CFAP54Q96N23 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP54Q96N23 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP54Q96N23 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP54Q96N23 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.62■□□□□ 0.89
CFAP54Q96N23 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP54Q96N23 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP54Q96N23 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP54Q96N23 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 AC113410.3-201ENST00000623366 203 ntBASIC20.61■□□□□ 0.89
CFAP54Q96N23 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CFAP54Q96N23 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP54Q96N23 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP54Q96N23 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP54Q96N23 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP54Q96N23 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP54Q96N23 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 AC005363.2-201ENST00000618631 242 ntBASIC20.59■□□□□ 0.89
CFAP54Q96N23 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 AC009947.2-201ENST00000444014 672 ntBASIC20.59■□□□□ 0.89
CFAP54Q96N23 RARRES2P10-201ENST00000564312 460 ntBASIC20.59■□□□□ 0.89
CFAP54Q96N23 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 AL358472.4-201ENST00000633140 710 ntBASIC20.59■□□□□ 0.89
CFAP54Q96N23 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CFAP54Q96N23 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP54Q96N23 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP54Q96N23 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP54Q96N23 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.58■□□□□ 0.89
CFAP54Q96N23 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.58■□□□□ 0.89
CFAP54Q96N23 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP54Q96N23 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP54Q96N23 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.58■□□□□ 0.89
CFAP54Q96N23 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.58■□□□□ 0.88
CFAP54Q96N23 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.58■□□□□ 0.88
CFAP54Q96N23 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.58■□□□□ 0.88
CFAP54Q96N23 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.58■□□□□ 0.88
CFAP54Q96N23 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP54Q96N23 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 WWOX-216ENST00000569818 525 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms