Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 AC006455.2-201ENST00000429931 906 ntBASIC20.44■□□□□ 0.86
SPDL1Q96EA4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPDL1Q96EA4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDL1Q96EA4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 AC068587.7-201ENST00000641602 218 ntBASIC20.42■□□□□ 0.86
SPDL1Q96EA4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDL1Q96EA4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.41■□□□□ 0.86
SPDL1Q96EA4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 AC009299.2-201ENST00000482477 511 ntBASIC20.4■□□□□ 0.86
SPDL1Q96EA4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SPDL1Q96EA4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SPDL1Q96EA4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDL1Q96EA4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPDL1Q96EA4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms