Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 LINC02228-203ENST00000641970 1355 ntBASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.66■■□□□ 1.06
TRAF3IP1Q8TDR0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP1Q8TDR0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
TRAF3IP1Q8TDR0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRAF3IP1Q8TDR0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
TRAF3IP1Q8TDR0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRAF3IP1Q8TDR0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TRAF3IP1Q8TDR0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 AC008175.2-201ENST00000612840 297 ntBASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAF3IP1Q8TDR0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRAF3IP1Q8TDR0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 AP004607.4-201ENST00000530158 1459 ntBASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRAF3IP1Q8TDR0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms