Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 KRT19P1-201ENST00000405746 1186 ntBASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 AC104187.1-201ENST00000607510 612 ntBASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMGCLL1Q8TB92 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLL1Q8TB92 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.45■□□□□ 0.87
HMGCLL1Q8TB92 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 AC010141.2-201ENST00000452426 721 ntBASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLL1Q8TB92 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 AL049796.1-201ENST00000565336 1766 ntBASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCLL1Q8TB92 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLL1Q8TB92 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms