Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 AC007375.3-201ENST00000600936 2314 ntBASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 AL049796.1-201ENST00000565336 1766 ntBASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFBP1Q8NEF9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRFBP1Q8NEF9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 KRT18P11-201ENST00000435214 1283 ntBASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRFBP1Q8NEF9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 KRT18P5-201ENST00000436075 1291 ntBASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 AC245052.3-201ENST00000450182 901 ntBASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRFBP1Q8NEF9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SRFBP1Q8NEF9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 SLC7A5P2-201ENST00000553010 536 ntBASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 KRT18P61-201ENST00000585825 1298 ntBASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.83■□□□□ 0.77
SRFBP1Q8NEF9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRFBP1Q8NEF9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRFBP1Q8NEF9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.82■□□□□ 0.76
SRFBP1Q8NEF9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.82■□□□□ 0.76
SRFBP1Q8NEF9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.82■□□□□ 0.76
SRFBP1Q8NEF9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms