Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC89Q8N998 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC89Q8N998 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC89Q8N998 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC89Q8N998 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC89Q8N998 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC89Q8N998 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.58■■□□□ 1.05
CCDC89Q8N998 AC106739.1-201ENST00000617035 715 ntBASIC21.58■■□□□ 1.05
CCDC89Q8N998 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC89Q8N998 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC89Q8N998 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC89Q8N998 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC89Q8N998 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC89Q8N998 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC89Q8N998 AC055733.4-201ENST00000638462 1354 ntBASIC21.58■■□□□ 1.04
CCDC89Q8N998 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC89Q8N998 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
CCDC89Q8N998 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC89Q8N998 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC89Q8N998 PLK5-205ENST00000642079 1969 ntBASIC21.57■■□□□ 1.04
CCDC89Q8N998 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC89Q8N998 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.57■■□□□ 1.04
CCDC89Q8N998 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC89Q8N998 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC89Q8N998 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC89Q8N998 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC89Q8N998 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC89Q8N998 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC89Q8N998 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC89Q8N998 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC89Q8N998 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 AC005224.4-201ENST00000583262 1652 ntBASIC21.56■■□□□ 1.04
CCDC89Q8N998 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC89Q8N998 GABARAPL3-202ENST00000624044 1851 ntBASIC21.56■■□□□ 1.04
CCDC89Q8N998 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC89Q8N998 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 EDA-201ENST00000338901 1233 ntBASIC21.56■■□□□ 1.04
CCDC89Q8N998 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC89Q8N998 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC89Q8N998 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CCDC89Q8N998 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC89Q8N998 BX005040.4-201ENST00000637145 1518 ntBASIC21.55■■□□□ 1.04
CCDC89Q8N998 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 AP001330.3-201ENST00000520123 633 ntBASIC21.55■■□□□ 1.04
CCDC89Q8N998 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC89Q8N998 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC89Q8N998 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC89Q8N998 AP005212.1-201ENST00000581547 1997 ntBASIC21.54■■□□□ 1.04
CCDC89Q8N998 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC89Q8N998 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC89Q8N998 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC89Q8N998 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC89Q8N998 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC89Q8N998 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC89Q8N998 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC89Q8N998 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC89Q8N998 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC89Q8N998 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC89Q8N998 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC89Q8N998 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
CCDC89Q8N998 AL355001.2-201ENST00000620617 1191 ntBASIC21.53■■□□□ 1.04
CCDC89Q8N998 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms