Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYCE1Q8N0S2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SYCE1Q8N0S2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SYCE1Q8N0S2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22■■□□□ 1.11
SYCE1Q8N0S2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22■■□□□ 1.11
SYCE1Q8N0S2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22■■□□□ 1.11
SYCE1Q8N0S2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYCE1Q8N0S2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22■■□□□ 1.11
SYCE1Q8N0S2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYCE1Q8N0S2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SYCE1Q8N0S2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SYCE1Q8N0S2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SYCE1Q8N0S2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22■■□□□ 1.11
SYCE1Q8N0S2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 AC007225.1-201ENST00000566331 1836 ntBASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 AC005224.4-201ENST00000583262 1652 ntBASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SYCE1Q8N0S2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYCE1Q8N0S2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 AC024257.2-201ENST00000549699 147 ntBASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 AL136162.1-201ENST00000607711 1078 ntBASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 AC105233.4-201ENST00000642045 216 ntBASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYCE1Q8N0S2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SYCE1Q8N0S2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 AC027702.1-201ENST00000563810 1770 ntBASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 AC135279.3-201ENST00000610945 1311 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms